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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
31
DNA accessibility
19
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
17
October, 2019
3
June, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
52
Homo sapiens
Biosample type
52
tissue
primary cell
Organ
774
liver
642
connective tissue
599
pancreas
487
adipose tissue
377
heart
316
kidney
263
brain
198
blood vessel
198
vasculature
158
bone element
139
artery
122
limb
118
epithelium
81
musculature of body
61
blood
61
bodily fluid
52
eye
43
nerve
37
embryo
24
spleen
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
Project
52
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
52
AMP-T2D consortium
files.file_type!
cool
biosample_type!
primary cell
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
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