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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
6
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
November, 2018
3
December, 2018
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
10
Homo sapiens
Biosample type
10
tissue
Organ
540
liver
535
connective tissue
481
pancreas
423
adipose tissue
211
epithelium
127
heart
101
kidney
87
vasculature
83
blood vessel
65
artery
58
bone element
56
brain
54
blood
54
bodily fluid
43
limb
41
musculature of body
18
embryo
18
ureter
10
spleen
7
nerve
5
eye
3
vein
1
pericardium
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
10
AMP-T2D consortium
files.file_type!
cool
target.investigated_as!
histone
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
6
2
1
1
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