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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
278
ChIP-seq
Assay category
278
DNA binding
Target of assay
582
histone modification
581
histone
475
transcription factor
302
narrow histone mark
278
broad histone mark
274
control
93
RNA binding protein
89
recombinant protein
35
chromatin remodeller
5
other context
5
other post-translational modification
Date released
56
May, 2019
46
November, 2017
43
October, 2019
37
April, 2019
33
August, 2017
19
October, 2018
15
December, 2017
8
February, 2018
6
August, 2021
6
November, 2019
5
October, 2017
4
January, 2019
Available data
309
bigWig
308
bed narrowPeak
278
bam
221
bigBed narrowPeak
96
tagAlign
85
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
274
Homo sapiens
Biosample type
222
tissue
primary cell
37
in vitro differentiated cells
18
cell line
1
stem cell
Organ
61
brain
43
pancreas
37
heart
36
blood vessel
36
vasculature
34
limb
28
liver
16
nerve
14
artery
13
epithelium
12
connective tissue
10
kidney
4
embryo
4
musculature of body
4
spleen
Project
278
AMP
Genome assembly (visualization)
276
GRCh38
240
hg19
Lab
278
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
files.file_type!
cool
biosample_type!
primary cell
BIOSAMPLE
ASSAY
278 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
16
heart left ventricle
15
tibial artery
14
body of pancreas
11
kidney
10
+ See 23 more…
in vitro differentiated cells
adipocyte
12
hepatocyte
7
neural progenitor cell
6
pancreatic endoderm
4
definitive endodermal cell
2
+ See 5 more…
cell line
HepG2
8
EndoC_BH1
6
Panc1
4
stem cell
hESC
1
See all biosamples
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