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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
371
ChIP-seq
Assay category
371
DNA binding
Target of assay
763
histone modification
762
histone
493
transcription factor
390
narrow histone mark
371
broad histone mark
297
control
103
RNA binding protein
89
recombinant protein
35
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
93
August, 2017
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
15
December, 2017
10
May, 2021
10
October, 2017
August, 2021
8
February, 2018
6
November, 2019
4
January, 2019
Available data
302
bigWig
301
bed narrowPeak
272
bam
221
bigBed narrowPeak
90
tagAlign
85
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
367
Homo sapiens
Biosample type
303
tissue
primary cell
49
in vitro differentiated cells
18
cell line
1
stem cell
Organ
70
brain
57
heart
51
pancreas
40
connective tissue
40
liver
36
blood vessel
36
vasculature
34
limb
20
adipose tissue
16
musculature of body
16
nerve
14
artery
13
epithelium
10
kidney
4
embryo
4
spleen
Project
371
AMP
Genome assembly (visualization)
290
GRCh38
247
hg19
Lab
341
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
10
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
files.file_type!
cool
biosample_type!
primary cell
month_released!
August, 2021
BIOSAMPLE
ASSAY
371 results
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Clear Filters
ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
+ See 26 more…
in vitro differentiated cells
adipocyte
20
embryonic stem cell
11
hepatocyte
7
pancreatic endoderm
4
definitive endodermal cell
2
+ See 4 more…
cell line
HepG2
8
EndoC_BH1
6
Panc1
4
stem cell
hESC
1
See all biosamples
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