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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
115
total RNA-seq
34
ATAC-seq
18
snATAC-seq
17
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
34
DNA accessibility
Date released
18
May, 2022
14
February, 2023
5
May, 2021
Available data
18
bam
18
bed narrowPeak
18
fastq
5
bigWig
Organism
37
Homo sapiens
Biosample type
29
tissue
5
in vitro differentiated cells
3
cell line
Organ
29
pancreas
Project
23
AMP
14
T1D
Genome assembly (visualization)
23
hg19
Lab
343
AMP-T2D consortium
75
Katalin Susztak, Upenn
49
Klaus Kaestner, Upenn
37
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
csv
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
CRISPR genome editing followed by DNA sequencing
tissue
islet of Langerhans
29
in vitro differentiated cells
embryonic stem cell
5
cell line
EndoC_BH1
3
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