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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
3
single cell RNA-seq
Assay category
52
DNA binding
3
Transcription
Target of assay
219
histone
219
histone modification
129
narrow histone mark
90
broad histone mark
55
control
20
transcription factor
8
RNA binding protein
Date released
18
October, 2018
15
November, 2017
7
October, 2019
6
August, 2017
3
July, 2019
3
May, 2019
3
October, 2017
Available data
49
bam
24
fastq
20
tagAlign
6
bigWig
3
tsv
Organism
55
Homo sapiens
Biosample type
49
tissue
6
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
55
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
55
AMP-T2D consortium
files.file_type!
csv
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
single cell RNA-seq
tissue
subcutaneous adipose tissue
10
omental fat pad
8
subcutaneous abdominal adipose tissue
5
brain
3
layer of hippocampus
3
+ See 14 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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