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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
200
DNA binding
34
DNA accessibility
24
Transcription
3
3D chromatin structure
2
DNA methylation
Date released
30
June, 2019
2
July, 2019
1
February, 2023
1
October, 2019
Available data
35
bam
35
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
fastq
1
bed bed3
Organism
34
Homo sapiens
Biosample type
29
tissue
5
primary cell
Organ
163
kidney
112
pancreas
91
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
35
musculature of body
34
brain
32
eye
30
connective tissue
25
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
5
adipose tissue
3
nerve
3
vein
1
pituitary gland
1
skin of body
Project
34
AMP
Genome assembly (visualization)
31
GRCh38
22
hg19
Lab
34
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
34 results
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DNase-seq
ATAC-seq
FAIRE-seq
tissue
brain
12
1
frontal cortex
2
1
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
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primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
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