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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
Assay category
162
Transcription
129
DNA binding
74
DNA accessibility
9
DNA methylation
3
3D chromatin structure
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
18
control
16
transcription factor
10
RNA binding protein
Date released
57
April, 2019
40
May, 2024
21
May, 2019
6
February, 2021
5
October, 2019
Available data
111
bed narrowPeak
111
bigWig
88
bam
61
bigBed narrowPeak
6
tagAlign
Organism
129
Homo sapiens
Biosample type
123
tissue
6
cell line
primary cell
Organ
200
brain
129
heart
96
liver
79
blood vessel
79
vasculature
71
pancreas
66
limb
51
connective tissue
37
kidney
36
adipose tissue
35
nerve
34
artery
29
musculature of body
18
epithelium
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
129
AMP
Genome assembly (visualization)
110
GRCh38
71
hg19
Lab
89
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
files.file_type!
fastq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
129 results
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ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
heart right ventricle
13
right atrium auricular region
10
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cell line
smooth muscle cell of the coronary artery
6
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