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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
2
ChIP-seq
Assay category
195
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
187
June, 2019
9
October, 2019
1
November, 2020
Available data
3391
bam
3129
bigWig
1777
bed narrowPeak
1569
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
hic
20
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
197
Homo sapiens
Biosample type
167
tissue
29
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
197
AMP
Genome assembly (visualization)
195
GRCh38
174
hg19
Lab
197
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
197 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
See all biosamples
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