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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
12
DNA accessibility
Date released
92
February, 2021
4
February, 2023
1
May, 2021
Available data
84
txt
8
bam
8
bed narrowPeak
4
bed bed3
Organism
97
Homo sapiens
Biosample type
96
tissue
1
primary cell
Organ
321
heart
288
kidney
248
brain
245
pancreas
217
epithelium
169
vasculature
166
blood vessel
142
liver
115
limb
109
connective tissue
97
bone element
87
musculature of body
85
artery
49
adipose tissue
42
eye
38
nerve
22
vein
18
ureter
12
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
blood
1
bodily fluid
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
96
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
96
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
fastq
assay_title!
total RNA-seq
snATAC-seq
BIOSAMPLE
ASSAY
97 results
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RNA microarray
ATAC-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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primary cell
megakaryocyte
1
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