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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
3
Hi-C
1
MPRA
Assay category
16
DNA binding
3
3D chromatin structure
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
2
control
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
October, 2022
3
January, 2018
3
March, 2019
1
August, 2022
Available data
76
bam
fastq
47
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
2
tsv
1
txt
Organism
19
Homo sapiens
Biosample type
16
tissue
3
primary cell
1
cell line
Organ
19
pancreas
3
epithelium
Project
17
AMP
3
HPAP
Genome assembly (visualization)
17
hg19
14
GRCh38
Lab
17
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
files.file_type!
fastq
bedpe
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
Hi-C
MPRA
tissue
endocrine pancreas
16
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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