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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
35
ATAC-seq
20
ChIP-seq
8
WGBS
3
pCHi-C
3
total RNA-seq
Assay category
96
Transcription
35
DNA accessibility
20
DNA binding
8
DNA methylation
Target of assay
20
control
Date released
92
August, 2021
36
February, 2023
10
April, 2019
8
July, 2019
6
May, 2019
3
February, 2020
3
March, 2020
2
February, 2021
2
June, 2019
Available data
98
tsv
38
bed narrowPeak
29
bam
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
bigBed narrowPeak
2
tagAlign
Organism
162
Homo sapiens
Biosample type
158
tissue
2
cell line
2
primary cell
Organ
218
kidney
178
pancreas
162
heart
123
epithelium
91
liver
89
bone element
70
blood vessel
70
vasculature
66
connective tissue
56
brain
48
artery
42
adipose tissue
27
eye
26
limb
23
musculature of body
20
lung
12
nerve
8
blood
8
bodily fluid
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
162
AMP
Genome assembly (visualization)
132
GRCh38
hg19
Lab
162
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
bigBed narrowPeak
assembly!
hg19
BIOSAMPLE
ASSAY
162 results
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single cell RNA-seq
ATAC-seq
ChIP-seq
WGBS
pCHi-C
total RNA-seq
tissue
coronary artery
35
2
1
heart left ventricle
18
6
4
1
heart right ventricle
17
2
2
1
right cardiac atrium
18
1
1
1
left cardiac atrium
18
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cell line
smooth muscle cell of the coronary artery
2
primary cell
cardiac fibroblast
2
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