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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
21
ATAC-seq
6
single cell RNA-seq
3
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
21
DNA accessibility
6
Transcription
3
DNA binding
Target of assay
3
control
Date released
272
August, 2021
156
May, 2022
126
February, 2023
119
February, 2021
107
October, 2019
103
August, 2017
96
May, 2021
81
May, 2020
47
September, 2023
44
March, 2020
30
November, 2019
25
February, 2020
25
November, 2017
23
July, 2019
23
May, 2019
19
April, 2020
18
September, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
8
June, 2019
6
October, 2017
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
October, 2018
1
August, 2022
Available data
572
bam
559
tsv
bigWig
89
txt
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
119
Homo sapiens
Biosample type
101
tissue
13
cell line
4
in vitro differentiated cells
1
primary cell
Organ
92
bone element
10
artery
10
blood vessel
10
heart
10
vasculature
8
kidney
8
skeleton
6
limb
5
connective tissue
3
liver
Project
119
AMP
Genome assembly (visualization)
23
hg19
17
GRCh38
Lab
119
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
1
inconsistent replicate
files.file_type!
fastq
bigWig
BIOSAMPLE
ASSAY
119 results
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Clear Filters
RNA microarray
ATAC-seq
single cell RNA-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 9 more…
cell line
smooth muscle cell of the coronary artery
8
2
HepG2
1
1
iPSC derived cell line
1
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
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