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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
179
DNase-seq
Assay category
179
DNA accessibility
Date released
173
June, 2019
5
October, 2019
1
November, 2020
Available data
3075
bam
2868
bigWig
1666
bed narrowPeak
1444
tsv
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
179
Homo sapiens
Biosample type
167
tissue
11
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
179
AMP
Genome assembly (visualization)
179
GRCh38
162
hg19
Lab
179
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
fastq
tar
organ_slims!
epithelium
BIOSAMPLE
ASSAY
179 results
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DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
cardiac fibroblast
3
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
cardiac muscle cell
1
+ See 4 more…
cell line
Panc1
1
See all biosamples
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