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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
745
histone
745
histone modification
383
narrow histone mark
362
broad histone mark
162
control
55
transcription factor
21
RNA binding protein
7
recombinant protein
2
nucleotide modification
Date released
5
May, 2021
5
May, 2024
4
April, 2019
4
May, 2019
2
June, 2019
1
August, 2021
Available data
98
bigWig
97
bed narrowPeak
95
bam
86
bigBed narrowPeak
fastq
7
bed broadPeak
7
bigBed broadPeak
2
bed bed3+
tar
Organism
21
Homo sapiens
Biosample type
13
tissue
5
in vitro differentiated cells
2
primary cell
1
cell line
Organ
11
heart
epithelium
3
blood vessel
3
kidney
3
vasculature
1
artery
1
connective tissue
1
eye
1
liver
1
pancreas
Project
21
AMP
Genome assembly (visualization)
14
GRCh38
10
hg19
Lab
10
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
tar
organ_slims!
epithelium
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
tissue
left cardiac atrium
5
heart left ventricle
3
ascending aorta
1
coronary artery
1
kidney
1
+ See 2 more…
in vitro differentiated cells
embryonic stem cell
5
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
cell line
HepG2
1
See all biosamples
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