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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
Date released
101
May, 2022
Available data
1986
bam
1817
bed narrowPeak
1767
bigWig
1042
bigBed narrowPeak
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
101
zippedFastqFolder
89
txt
xls
56
tsv
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
101
Homo sapiens
Biosample type
101
primary cell
Organ
80
epithelium
80
pancreas
Project
101
HPAP
Lab
101
Klaus Kaestner, Upenn
files.file_type!
fastq
xls
assay_slims!
Transcription
BIOSAMPLE
ASSAY
101 results
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WGBS
ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
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