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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
DNase-seq
2
ChIP-seq
Assay category
172
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
164
June, 2019
9
October, 2019
1
November, 2020
Available data
3016
bigWig
2998
bam
1598
bed narrowPeak
1402
tsv
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
250
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
174
Homo sapiens
Biosample type
151
tissue
22
primary cell
1
cell line
Organ
71
kidney
36
limb
33
musculature of body
27
heart
20
brain
18
ureter
12
epithelium
12
vasculature
10
blood vessel
6
connective tissue
4
artery
4
eye
4
vein
3
pancreas
2
liver
2
nerve
1
adipose tissue
Project
174
AMP
Genome assembly (visualization)
195
GRCh38
174
hg19
Lab
174
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
174 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
muscle of arm
17
heart
16
kidney
13
muscle of leg
13
brain
12
+ See 24 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
+ See 13 more…
cell line
Panc1
1
See all biosamples
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