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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
269
ChIP-seq
Assay category
269
DNA binding
Target of assay
201
histone
201
histone modification
120
narrow histone mark
81
broad histone mark
63
control
5
transcription factor
Date released
May, 2021
66
August, 2017
66
November, 2017
50
May, 2020
49
October, 2019
24
August, 2021
8
February, 2021
6
October, 2017
Available data
3115
bam
2826
bigWig
1644
bed narrowPeak
1427
tsv
fastq
1042
bigBed narrowPeak
322
bed broadPeak
308
tagAlign
285
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
269
Homo sapiens
Biosample type
223
tissue
34
in vitro differentiated cells
8
cell line
4
primary cell
Organ
110
brain
74
liver
22
connective tissue
15
musculature of body
9
pancreas
8
adipose tissue
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
1
pituitary gland
Project
269
AMP
Genome assembly (visualization)
125
GRCh38
113
hg19
Lab
269
AMP-T2D consortium
files.file_type!
fastq
month_released!
May, 2021
BIOSAMPLE
ASSAY
269 results
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Clear Filters
ChIP-seq
tissue
liver
70
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
skeletal muscle tissue
15
+ See 42 more…
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
primary cell
hepatocyte
4
See all biosamples
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