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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
2
pCHi-C
1
ATAC-seq
Assay category
9
DNA accessibility
Date released
8
January, 2021
1
January, 2018
1
March, 2020
1
May, 2021
Available data
60
bam
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
11
Homo sapiens
Biosample type
8
primary cell
2
tissue
1
cell line
Organ
583
connective tissue
465
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
265
brain
261
epithelium
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
9
T1D
2
AMP
Genome assembly (visualization)
1
hg19
Lab
9
Kyle Gaulton, UCSD
2
AMP-T2D consortium
files.file_type!
fastq
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
11 results
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snATAC-seq
pCHi-C
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
tissue
thymus
2
cell line
GM12878
1
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