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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
41
WGBS
3
Hi-C
Assay category
DNA accessibility
51
Transcription
41
DNA methylation
3
3D chromatin structure
Date released
74
May, 2022
18
September, 2020
3
October, 2022
Available data
fastq
93
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
95
Homo sapiens
Biosample type
95
primary cell
Organ
44
epithelium
44
pancreas
Project
95
HPAP
Genome assembly (visualization)
3
hg19
Lab
2232
AMP-T2D consortium
285
Kyle Gaulton, UCSD
95
Klaus Kaestner, Upenn
61
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
Audit category:
3
audit script error
files.file_type!
fastq
month_released!
April, 2020
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
95 results
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single cell RNA-seq
WGBS
Hi-C
primary cell
Langerhans cell
51
pancreatic alpha cell
25
1
pancreatic beta cell
16
1
pancreatic acinar cell
1
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