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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
DNase-seq
26
ChIP-seq
Assay category
186
DNA accessibility
26
DNA binding
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
Date released
182
June, 2019
20
August, 2017
6
November, 2017
3
October, 2019
1
November, 2020
Available data
3212
bam
3019
bigWig
1688
bed narrowPeak
1532
tsv
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
212
Homo sapiens
Biosample type
188
tissue
23
primary cell
1
cell line
Organ
78
kidney
46
musculature of body
36
brain
36
limb
30
heart
18
epithelium
18
ureter
13
vasculature
blood vessel
11
pancreas
8
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
liver
2
nerve
Project
212
AMP
Genome assembly (visualization)
191
GRCh38
190
hg19
Lab
212
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
month_released!
January, 2021
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
212 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 39 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 14 more…
cell line
Panc1
1
See all biosamples
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