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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
255
ChIP-seq
189
DNase-seq
2
FAIRE-seq
Assay category
255
DNA binding
191
DNA accessibility
Target of assay
241
histone
241
histone modification
149
broad histone mark
92
narrow histone mark
14
transcription factor
12
RNA binding protein
Date released
210
June, 2019
97
May, 2019
October, 2019
64
April, 2019
57
November, 2017
14
October, 2018
2
July, 2019
1
August, 2017
1
November, 2020
Available data
3142
bam
2922
bigWig
1588
bed narrowPeak
1584
tsv
fastq
972
bigBed narrowPeak
349
tagAlign
313
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
446
Homo sapiens
Biosample type
393
tissue
53
primary cell
Organ
113
brain
103
kidney
94
heart
47
musculature of body
46
vasculature
44
blood vessel
38
limb
22
epithelium
19
pancreas
18
ureter
16
connective tissue
6
eye
5
artery
2
liver
1
adipose tissue
Project
446
AMP
Genome assembly (visualization)
442
GRCh38
371
hg19
Lab
446
AMP-T2D consortium
Audit category:
24
inconsistent ontology term
files.file_type!
fastq
month_released!
October, 2019
BIOSAMPLE
ASSAY
446 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
kidney
18
13
1
heart left ventricle
28
3
heart
7
18
muscle of leg
6
13
muscle of arm
17
+ See 45 more…
primary cell
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
kidney epithelial cell
4
1
cardiac muscle cell
2
1
+ See 19 more…
See all biosamples
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