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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
16
DNA binding
8
Transcription
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
2
control
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
81
bam
fastq
52
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
11
tsv
Organism
26
Homo sapiens
Biosample type
19
tissue
5
primary cell
2
in vitro differentiated cells
Organ
16
pancreas
6
epithelium
5
liver
3
kidney
Project
26
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
26
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
endocrine pancreas
16
kidney
1
kidney interstitium
1
renal glomerulus
1
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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