Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
306
ChIP-seq
182
ATAC-seq
142
DNase-seq
1
FAIRE-seq
Assay category
325
DNA accessibility
306
DNA binding
Target of assay
292
histone
292
histone modification
154
broad histone mark
138
narrow histone mark
14
transcription factor
12
RNA binding protein
Date released
138
June, 2019
76
October, 2019
68
May, 2019
65
April, 2019
64
August, 2021
63
February, 2023
40
May, 2024
27
May, 2020
20
August, 2017
20
May, 2022
20
November, 2019
14
October, 2018
8
February, 2021
6
July, 2019
2
March, 2020
Available data
1681
bam
1570
bigWig
1053
tsv
792
bed narrowPeak
445
bigBed narrowPeak
fastq
178
bed bed3+
177
bed broadPeak
157
txt
149
bigBed broadPeak
120
tagAlign
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
4
bed bed3
1
bedpe
Organism
631
Homo sapiens
Biosample type
631
tissue
201
primary cell
57
cell line
39
in vitro differentiated cells
Organ
brain
173
heart
153
kidney
100
blood vessel
100
vasculature
92
limb
62
artery
52
liver
51
musculature of body
46
pancreas
30
eye
27
nerve
18
ureter
12
epithelium
8
bone element
8
skeleton
4
adipose tissue
4
connective tissue
1
pituitary gland
Project
629
AMP
2
T1D
Genome assembly (visualization)
552
GRCh38
486
hg19
Lab
507
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
organ_slims!
brain
BIOSAMPLE
ASSAY
631 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
kidney
20
64
13
1
liver
32
20
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
29
2
3
+ See 55 more…
See all biosamples
Download