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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
WGBS
17
RRBS
1
DNAme array
Assay category
1435
Transcription
950
DNA binding
699
DNA accessibility
76
DNA methylation
30
3D chromatin structure
Date released
41
May, 2022
27
July, 2019
7
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
35
bed bedMethyl
35
bigBed bedMethyl
fastq
17
bam
16
bigWig
6
tsv
Organism
76
Homo sapiens
Biosample type
51
primary cell
25
tissue
Organ
47
epithelium
43
pancreas
10
heart
4
connective tissue
4
kidney
4
liver
4
musculature of body
3
adipose tissue
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
41
HPAP
35
AMP
Genome assembly (visualization)
15
hg19
8
GRCh38
Lab
41
Klaus Kaestner, Upenn
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
organ_slims!
embryo
biosample_type!
cell line
BIOSAMPLE
ASSAY
76 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
liver
2
+ See 10 more…
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