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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
934
total RNA-seq
687
ChIP-seq
231
ATAC-seq
174
single cell RNA-seq
150
DNase-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
17
WGBS
16
Hi-C
16
small RNA-seq
8
RRBS
4
MeRIP-seq
3
snDrop-seq
2
FAIRE-seq
Date released
20
March, 2020
4
October, 2019
1
May, 2021
Available data
20
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
17
primary cell
6
cell line
4
in vitro differentiated cells
4
stem cell
Organ
4
eye
3
heart
2
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
24
AMP
1
T1D
Lab
24
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
organ_slims!
ureter
BIOSAMPLE
ASSAY
25 results
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pCHi-C
tissue
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
heart left ventricle
1
heart right ventricle
1
liver
1
lung
1
ovary
1
pancreas
1
psoas muscle
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
See all biosamples
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