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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
3
small RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
398
Transcription
2
DNA accessibility
Date released
386
February, 2021
12
July, 2019
1
June, 2019
1
November, 2019
Available data
442
bam
425
bigWig
401
tsv
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
400
Homo sapiens
Biosample type
398
tissue
2
primary cell
Organ
494
connective tissue
400
adipose tissue
288
pancreas
223
brain
220
liver
211
heart
179
vasculature
177
blood vessel
144
kidney
129
epithelium
114
limb
102
artery
66
bone element
57
musculature of body
42
nerve
20
vein
18
ureter
10
embryo
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
400
AMP
Genome assembly (visualization)
400
GRCh38
400
hg19
Lab
400
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
400 results
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total RNA-seq
small RNA-seq
ATAC-seq
DNase-seq
tissue
adipose tissue
381
subcutaneous adipose tissue
6
1
omental fat pad
4
1
1
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
primary cell
mesenchymal stem cell of adipose
1
1
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