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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
8
snATAC-seq
4
total RNA-seq
Assay category
21
DNA accessibility
4
Transcription
Date released
8
February, 2021
8
February, 2023
8
January, 2021
1
January, 2018
Available data
68
bam
62
bed narrowPeak
fastq
55
bigWig
54
bigBed narrowPeak
4
bed bed3
4
txt
Organism
25
Homo sapiens
Biosample type
16
tissue
8
primary cell
1
cell line
Organ
583
connective tissue
475
pancreas
447
adipose tissue
354
kidney
353
heart
326
liver
267
epithelium
265
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
17
AMP
8
T1D
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
17
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
fastq
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
snATAC-seq
total RNA-seq
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
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