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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
1
RRBS
Assay category
5
DNA accessibility
3
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
3
control
Date released
7
July, 2019
5
June, 2019
Available data
20
bigWig
17
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
fastq
8
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
12
Homo sapiens
Biosample type
253
tissue
12
primary cell
Organ
168
epithelium
88
pancreas
36
connective tissue
36
kidney
31
vasculature
28
blood vessel
22
vein
14
liver
14
musculature of body
13
heart
12
brain
8
blood
8
bodily fluid
5
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
12
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
12 results
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DNase-seq
Hi-C
single cell RNA-seq
RRBS
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
cerebellar granule cell
2
choroid plexus epithelial cell
1
1
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