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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
24
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
control
8
narrow histone mark
Date released
31
October, 2019
1
February, 2020
Available data
31
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
32
tissue
Organ
573
connective tissue
452
pancreas
442
adipose tissue
342
kidney
333
heart
295
liver
254
epithelium
239
brain
210
vasculature
207
blood vessel
159
bone element
132
artery
105
limb
88
musculature of body
60
eye
32
nerve
20
lung
20
vein
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
32
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
32
AMP-T2D consortium
files.file_type!
fastq
target.investigated_as!
control
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
5
2
1
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