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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
12
ATAC-seq
Assay category
14
Transcription
12
DNA accessibility
Date released
8
August, 2021
8
February, 2021
8
February, 2023
2
May, 2021
Available data
44
bam
29
bigWig
fastq
22
bed narrowPeak
14
tsv
4
bed bed3
4
txt
3
bed bed3+
Organism
26
Homo sapiens
Biosample type
16
tissue
8
cell line
2
in vitro differentiated cells
Organ
583
connective tissue
475
pancreas
447
adipose tissue
354
kidney
353
heart
326
liver
267
epithelium
265
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
26 results
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total RNA-seq
ATAC-seq
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
cell line
H1-hESC
8
in vitro differentiated cells
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
See all biosamples
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