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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
1
ChIP-seq
1
pCHi-C
Assay category
10
Transcription
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
2
May, 2021
1
March, 2020
1
October, 2019
Available data
36
bam
29
bigWig
fastq
15
tsv
14
bed narrowPeak
3
bed bed3+
Organism
12
Homo sapiens
Biosample type
8
cell line
2
in vitro differentiated cells
2
tissue
Organ
583
connective tissue
475
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
267
epithelium
265
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
12
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
12 results
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total RNA-seq
ChIP-seq
pCHi-C
cell line
H1-hESC
8
in vitro differentiated cells
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
bladder (urinary bladder)
1
islet of Langerhans
1
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