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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
96
DNA binding
Target of assay
69
histone
69
histone modification
45
broad histone mark
24
narrow histone mark
20
control
7
transcription factor
3
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
Available data
102
bam
79
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
fastq
6
tagAlign
Organism
96
Homo sapiens
Biosample type
73
tissue
17
primary cell
6
cell line
Organ
200
brain
100
liver
96
blood vessel
96
vasculature
94
heart
71
pancreas
66
limb
63
connective tissue
57
epithelium
52
kidney
39
musculature of body
36
adipose tissue
35
nerve
34
artery
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
96
AMP
Genome assembly (visualization)
73
hg19
71
GRCh38
Lab
96
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
cell line
smooth muscle cell of the coronary artery
6
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