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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
2
ChIP-seq
Assay category
11
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
7
June, 2019
6
October, 2019
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
13
Homo sapiens
Biosample type
8
primary cell
5
tissue
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
13
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
13 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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