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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
27
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
control
Date released
667
February, 2021
390
May, 2021
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
176
May, 2022
129
February, 2023
118
July, 2018
105
August, 2017
105
July, 2019
97
May, 2019
70
November, 2017
66
April, 2019
64
March, 2020
59
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
15
May, 2023
14
October, 2018
11
November, 2020
10
December, 2019
5
April, 2018
5
March, 2023
5
October, 2017
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
260
bam
260
bigWig
189
tsv
27
bed narrowPeak
27
tagAlign
Organism
318
Homo sapiens
Biosample type
170
tissue
147
primary cell
1
cell line
Organ
171
liver
Project
273
AMP
45
T1D
Genome assembly (visualization)
260
hg19
207
GRCh38
Lab
273
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
files.file_type!
fastq
target.investigated_as!
control
BIOSAMPLE
ASSAY
318 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
27
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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