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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
Assay category
274
DNA binding
Target of assay
588
histone
588
histone modification
314
narrow histone mark
274
broad histone mark
156
control
50
transcription factor
15
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
60
August, 2017
56
May, 2019
43
October, 2019
42
November, 2017
37
April, 2019
10
May, 2021
8
August, 2021
8
October, 2018
6
November, 2019
4
October, 2017
Available data
289
bigWig
288
bed narrowPeak
278
bam
221
bigBed narrowPeak
96
tagAlign
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
274
Homo sapiens
Biosample type
238
tissue
primary cell
25
in vitro differentiated cells
11
cell line
Organ
64
brain
37
heart
36
blood vessel
36
vasculature
34
limb
28
connective tissue
26
pancreas
20
adipose tissue
16
liver
16
musculature of body
16
nerve
14
artery
10
kidney
6
epithelium
Project
274
AMP
Genome assembly (visualization)
193
GRCh38
169
hg19
Lab
263
AMP-T2D consortium
10
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
files.file_type!
fastq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
274 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
liver
15
tibial artery
14
+ See 21 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
8
neural progenitor cell
7
cell line
EndoC_BH1
6
Panc1
4
HepG2
1
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