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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
18
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
2
control
Date released
23
October, 2019
Available data
21
bam
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
bedpe bed3+
1
tagAlign
1
tar
Organism
23
Homo sapiens
Biosample type
21
primary cell
2
tissue
Organ
938
pancreas
788
liver
682
connective tissue
517
epithelium
490
adipose tissue
390
heart
354
kidney
283
brain
232
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
21
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
hdf5
bedpe bed3+
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
tissue
islet of Langerhans
1
pituitary gland
1
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