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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
51
Transcription
41
DNA methylation
Date released
134
May, 2022
18
September, 2020
Available data
3368
bam
3153
bigWig
1803
bed narrowPeak
1599
tsv
fastq
1029
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
primary cell
Organ
80
epithelium
80
pancreas
Project
152
HPAP
Lab
152
Klaus Kaestner, Upenn
files.file_type!
hdf5
fastq
organ_slims!
spleen
BIOSAMPLE
ASSAY
152 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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