Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
58
total RNA-seq
3
ATAC-seq
1
FAIRE-seq
1
WGBS
Assay category
79
DNA binding
58
Transcription
4
DNA accessibility
1
DNA methylation
Target of assay
68
histone
68
histone modification
43
broad histone mark
25
narrow histone mark
9
transcription factor
5
RNA binding protein
2
control
Date released
56
February, 2021
39
May, 2019
32
October, 2019
8
July, 2019
6
November, 2017
1
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
hdf5
1
tar
Organism
142
Homo sapiens
Biosample type
65
tissue
56
cell line
21
primary cell
Organ
611
liver
596
pancreas
551
connective tissue
419
adipose tissue
280
epithelium
194
heart
187
brain
142
vasculature
139
blood vessel
81
artery
58
bone element
55
blood
55
bodily fluid
55
limb
53
kidney
35
musculature of body
29
nerve
27
embryo
15
spleen
13
vein
2
eye
1
pericardium
1
pituitary gland
Project
142
AMP
Genome assembly (visualization)
141
hg19
137
GRCh38
Lab
142
AMP-T2D consortium
files.file_type!
hdf5
bed bed3+
BIOSAMPLE
ASSAY
142 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
FAIRE-seq
WGBS
tissue
tibial artery
18
1
thoracic aorta
12
2
1
ascending aorta
13
1
aorta
11
1
1
coronary artery
3
1
cell line
smooth muscle cell of the coronary artery
4
52
primary cell
endothelial cell of umbilical vein
12
1
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download