Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
63
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
525
February, 2021
328
November, 2017
294
May, 2021
260
May, 2020
255
August, 2017
192
June, 2019
181
October, 2019
131
July, 2018
93
May, 2019
80
November, 2018
76
July, 2019
65
April, 2019
56
December, 2017
45
October, 2018
44
August, 2021
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
20
May, 2022
19
November, 2019
16
April, 2018
15
March, 2020
14
October, 2017
11
September, 2018
8
January, 2018
5
November, 2020
3
February, 2023
2
June, 2018
Available data
88
fastq
87
bam
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
80
Homo sapiens
Biosample type
57
cell line
23
tissue
Organ
52
liver
12
blood
12
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
80
AMP
Genome assembly (visualization)
79
GRCh38
71
hg19
Lab
80
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
hdf5
organ_slims!
epithelium
BIOSAMPLE
ASSAY
80 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
44
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 2 more…
See all biosamples
Download