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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
25
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
53
Transcription
25
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
21
October, 2019
3
May, 2019
2
July, 2019
2
June, 2019
Available data
101
bam
84
bigWig
74
bed narrowPeak
57
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
84
Homo sapiens
Biosample type
56
cell line
27
tissue
1
primary cell
Organ
622
pancreas
621
liver
569
connective tissue
425
adipose tissue
epithelium
224
heart
219
brain
153
vasculature
148
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
84
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
84
AMP-T2D consortium
files.file_type!
hdf5
organ_slims!
epithelium
BIOSAMPLE
ASSAY
84 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
smooth muscle cell of the coronary artery
1
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