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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
242
ChIP-seq
30
total RNA-seq
22
ATAC-seq
10
DNase-seq
4
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
4
3D chromatin structure
Date released
10
March, 2020
4
July, 2019
4
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Available data
4
hic
3
bedpe bed3+
1
bed bed3+
1
bigWig
hdf5
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
heart
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
files.file_type!
hdf5
BIOSAMPLE
ASSAY
4 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
tissue
heart
1
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