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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
ChIP-seq
22
total RNA-seq
16
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
146
DNA binding
22
Transcription
20
DNA accessibility
1
3D chromatin structure
Target of assay
128
histone
128
histone modification
89
narrow histone mark
39
broad histone mark
18
control
Date released
545
February, 2021
229
August, 2021
225
August, 2017
193
October, 2019
163
June, 2019
143
May, 2020
120
July, 2018
115
May, 2019
95
February, 2023
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
19
April, 2020
16
November, 2017
15
May, 2023
9
October, 2017
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
186
bam
160
bigWig
151
bed narrowPeak
tagAlign
47
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
193
Homo sapiens
Biosample type
193
tissue
34
primary cell
29
cell line
8
in vitro differentiated cells
Organ
69
limb
48
brain
42
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
1
adipose tissue
1
lymph node
1
pituitary gland
1
skin of body
Project
193
AMP
Genome assembly (visualization)
123
hg19
121
GRCh38
Lab
193
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
hdf5
tagAlign
BIOSAMPLE
ASSAY
193 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
2
tibial artery
23
1
2
heart
5
2
1
brain
5
1
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