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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
WGBS
21
RRBS
1
DNAme array
Assay category
1798
DNA binding
1465
Transcription
764
DNA accessibility
50
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
27
July, 2019
9
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
18
fastq
16
bam
15
bigWig
6
tsv
Organism
50
Homo sapiens
Biosample type
32
tissue
17
primary cell
1
cell line
Organ
12
epithelium
12
pancreas
10
heart
7
connective tissue
7
liver
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
44
AMP
6
HPAP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
44
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
files.file_type!
hdf5
zippedFastqFolder
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
50 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
pancreas
2
1
aorta
2
+ See 11 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
cell line
HepG2
1
See all biosamples
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