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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
18
DNA binding
4
DNA accessibility
2
3D chromatin structure
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
2
control
Date released
23
October, 2019
1
March, 2020
Available data
21
bam
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tagAlign
1
tar
Organism
24
Homo sapiens
Biosample type
22
primary cell
2
tissue
Organ
945
pancreas
790
liver
683
connective tissue
522
epithelium
491
adipose tissue
354
kidney
353
heart
283
brain
234
vasculature
228
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
18
hg19
13
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
1
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hdf5
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
2
1
tissue
islet of Langerhans
1
pituitary gland
1
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