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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
total RNA-seq
34
ATAC-seq
25
ChIP-seq
17
pCHi-C
1
DNAme array
Assay category
25
DNA binding
Target of assay
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
318
November, 2017
98
August, 2017
70
November, 2018
63
December, 2017
46
October, 2019
44
October, 2018
34
December, 2018
28
May, 2019
25
May, 2021
23
August, 2021
23
May, 2020
20
April, 2019
18
January, 2019
12
June, 2019
8
February, 2018
8
February, 2021
6
September, 2017
5
May, 2024
3
November, 2019
3
October, 2017
Available data
7
bigWig
5
bam
5
tagAlign
4
bed narrowPeak
Organism
25
Homo sapiens
Biosample type
22
in vitro differentiated cells
3
primary cell
Organ
2
epithelium
2
pancreas
Project
25
AMP
Genome assembly (visualization)
7
hg19
4
GRCh38
Lab
20
Kyle Gaulton, UCSD
5
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
hdf5
target.investigated_as!
histone
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
17
cardiomyocytes
3
pancreatic PP cell
2
primary cell
CD8-positive, alpha-beta T cell
3
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