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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
Transcription
5
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
7
June, 2019
6
October, 2019
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
14
Homo sapiens
Biosample type
9
tissue
5
primary cell
Organ
573
liver
308
pancreas
258
brain
214
epithelium
178
connective tissue
177
heart
153
kidney
120
vasculature
114
blood vessel
107
limb
85
bone element
84
adipose tissue
84
musculature of body
68
blood
68
bodily fluid
38
artery
37
nerve
24
spleen
23
embryo
20
vein
18
ureter
14
eye
11
lung
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
stomach
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
14
AMP-T2D consortium
files.file_type!
hic
assay_slims!
Transcription
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
islet of Langerhans
2
4
retina
3
primary cell
retinal pigment epithelial cell
3
1
1
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