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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
349
transcription factor
89
recombinant protein
76
control
64
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
broad histone mark
17
narrow histone mark
2
other context
2
other post-translational modification
Date released
8
November, 2017
6
November, 2019
4
October, 2019
Available data
18
bam
18
bigWig
17
bed narrowPeak
10
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
8
fastq
6
tagAlign
Organism
18
Homo sapiens
Biosample type
222
tissue
100
primary cell
37
in vitro differentiated cells
18
cell line
1
stem cell
Organ
10
pancreas
8
liver
6
epithelium
Project
18
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
6
inconsistent control read length
files.file_type!
hic
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
HepG2
8
EndoC_BH1
6
Panc1
4
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