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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
3
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
1
March, 2020
Available data
33
bed narrowPeak
7
bam
bigBed narrowPeak
6
bigWig
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
54
tissue
2
primary cell
Organ
848
pancreas
656
connective tissue
481
adipose tissue
442
epithelium
431
liver
296
heart
249
kidney
159
bone element
159
brain
150
vasculature
148
blood vessel
116
artery
55
eye
47
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
7
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
28
hg19
Lab
56
AMP-T2D consortium
files.file_type!
hic
bigBed narrowPeak
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
adrenal gland
1
primary cell
retinal pigment epithelial cell
1
1
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