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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
16
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
1
WGBS
1
pCHi-C
Assay category
35
DNA accessibility
16
DNA binding
9
Transcription
1
DNA methylation
Target of assay
16
control
Date released
35
February, 2023
11
May, 2019
6
August, 2021
5
October, 2019
3
February, 2020
1
July, 2019
1
March, 2020
Available data
100
bed narrowPeak
87
bam
bigWig
62
bigBed narrowPeak
14
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
hic
Organism
62
Homo sapiens
Biosample type
62
tissue
10
cell line
5
primary cell
Organ
207
kidney
153
heart
129
pancreas
100
bone element
95
liver
66
connective tissue
65
adipose tissue
63
brain
62
blood vessel
62
vasculature
53
eye
46
artery
31
limb
23
musculature of body
20
lung
16
skeleton
15
epithelium
12
nerve
9
spleen
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
35
GRCh38
Lab
62
AMP-T2D consortium
files.file_type!
hic
bigWig
BIOSAMPLE
ASSAY
62 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
WGBS
pCHi-C
tissue
coronary artery
35
2
1
aorta
2
4
1
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
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